Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 MIR149-201ENST00000384879 89 ntBASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 RARRES2P10-201ENST00000564312 460 ntBASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.03■□□□□ 0.16
COMMD4Q9H0A8 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 MIR4651-201ENST00000582622 73 ntBASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 MIR3180-5-201ENST00000583743 153 ntBASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.02■□□□□ 0.16
COMMD4Q9H0A8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.02■□□□□ 0.15
COMMD4Q9H0A8 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AL163051.1-201ENST00000569214 1512 ntBASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD4Q9H0A8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms