Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.94■□□□□ 0.78
UBE2OQ9C0C9 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 ABCD1P5-201ENST00000445663 754 ntBASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.93■□□□□ 0.78
UBE2OQ9C0C9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 MCCD1P2-201ENST00000423228 335 ntBASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 AC009947.1-201ENST00000444350 727 ntBASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 YBX1P5-201ENST00000509441 847 ntBASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 SPCS2P1-201ENST00000561636 679 ntBASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBE2OQ9C0C9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 Z82202.1-201ENST00000623446 1880 ntBASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 CNN2P11-201ENST00000429351 262 ntBASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 AC064836.3-201ENST00000607928 673 ntBASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBE2OQ9C0C9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 PAWRP1-201ENST00000451083 565 ntBASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.9■□□□□ 0.78
UBE2OQ9C0C9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms