Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.25□□□□□ -0.29
MUC4Q99102 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
MUC4Q99102 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.25□□□□□ -0.29
MUC4Q99102 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.25□□□□□ -0.29
MUC4Q99102 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.25□□□□□ -0.29
MUC4Q99102 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC13.25□□□□□ -0.29
MUC4Q99102 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
MUC4Q99102 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
MUC4Q99102 AC006116.8-202ENST00000587620 1550 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 AC080080.1-201ENST00000625121 2420 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC13.24□□□□□ -0.29
MUC4Q99102 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.24□□□□□ -0.29
MUC4Q99102 KRT18P56-201ENST00000507275 550 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.24□□□□□ -0.29
MUC4Q99102 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.24□□□□□ -0.29
MUC4Q99102 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
MUC4Q99102 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MUC4Q99102 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MUC4Q99102 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 DUX4L26-201ENST00000489078 1255 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 AP003041.3-201ENST00000527151 707 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
MUC4Q99102 AC010947.1-201ENST00000623454 693 ntBASIC13.24□□□□□ -0.29
MUC4Q99102 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC13.24□□□□□ -0.29
MUC4Q99102 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
MUC4Q99102 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 AC108860.2-201ENST00000562760 2183 ntBASIC13.23□□□□□ -0.29
MUC4Q99102 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MUC4Q99102 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MUC4Q99102 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 AL024508.2-201ENST00000607749 1894 ntBASIC13.23□□□□□ -0.29
MUC4Q99102 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MUC4Q99102 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.23□□□□□ -0.29
MUC4Q99102 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
MUC4Q99102 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 AL163051.1-201ENST00000569214 1512 ntBASIC13.23□□□□□ -0.29
MUC4Q99102 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MUC4Q99102 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC13.23□□□□□ -0.29
MUC4Q99102 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.22□□□□□ -0.29
MUC4Q99102 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MUC4Q99102 MIR1238-201ENST00000408483 83 ntBASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms