Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YME1L1Q96TA2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.41■□□□□ 0.7
YME1L1Q96TA2 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
YME1L1Q96TA2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
YME1L1Q96TA2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.41■□□□□ 0.7
YME1L1Q96TA2 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 HNRNPA1P28-201ENST00000424481 961 ntBASIC19.4■□□□□ 0.7
YME1L1Q96TA2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 AP001160.2-201ENST00000596071 487 ntBASIC19.4■□□□□ 0.7
YME1L1Q96TA2 AC107918.4-202ENST00000641623 219 ntBASIC19.4■□□□□ 0.7
YME1L1Q96TA2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.4■□□□□ 0.7
YME1L1Q96TA2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YME1L1Q96TA2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.39■□□□□ 0.7
YME1L1Q96TA2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.39■□□□□ 0.7
YME1L1Q96TA2 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
YME1L1Q96TA2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
YME1L1Q96TA2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 PMS2P2-201ENST00000425039 1128 ntBASIC19.39■□□□□ 0.69
YME1L1Q96TA2 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 UNC93B6-202ENST00000528242 690 ntBASIC19.39■□□□□ 0.69
YME1L1Q96TA2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.39■□□□□ 0.69
YME1L1Q96TA2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 LINC01126-201ENST00000623515 1646 ntBASIC19.39■□□□□ 0.69
YME1L1Q96TA2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
YME1L1Q96TA2 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AL049812.1-201ENST00000432563 2267 ntBASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AC004967.1-201ENST00000453589 447 ntBASIC19.38■□□□□ 0.69
YME1L1Q96TA2 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AC112482.1-201ENST00000492080 688 ntBASIC19.38■□□□□ 0.69
YME1L1Q96TA2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AC112698.1-201ENST00000510299 916 ntBASIC19.38■□□□□ 0.69
YME1L1Q96TA2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 AP002414.3-201ENST00000589352 1468 ntBASIC19.38■□□□□ 0.69
YME1L1Q96TA2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
YME1L1Q96TA2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 AC007967.2-201ENST00000432613 625 ntBASIC19.37■□□□□ 0.69
YME1L1Q96TA2 HMGN1P19-201ENST00000436976 333 ntBASIC19.37■□□□□ 0.69
YME1L1Q96TA2 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.37■□□□□ 0.69
YME1L1Q96TA2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms