Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.07■□□□□ 0
GAFA1Q96PS6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC15.07■□□□□ 0
GAFA1Q96PS6 AC011498.5-201ENST00000592027 486 ntBASIC15.07■□□□□ 0
GAFA1Q96PS6 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.07■□□□□ 0
GAFA1Q96PS6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.07■□□□□ 0
GAFA1Q96PS6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 AC138028.4-201ENST00000564984 1845 ntBASIC15.07■□□□□ 0
GAFA1Q96PS6 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.07■□□□□ 0
GAFA1Q96PS6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.07■□□□□ 0
GAFA1Q96PS6 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
GAFA1Q96PS6 FLJ13224-201ENST00000313737 1514 ntBASIC15.07■□□□□ 0
GAFA1Q96PS6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.07■□□□□ 0
GAFA1Q96PS6 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 HCG11-201ENST00000411553 5696 ntBASIC15.06■□□□□ 0
GAFA1Q96PS6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.06■□□□□ 0
GAFA1Q96PS6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.06■□□□□ 0
GAFA1Q96PS6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 PCED1CP-201ENST00000419887 785 ntBASIC15.06■□□□□ 0
GAFA1Q96PS6 TSPY12P-201ENST00000421279 868 ntBASIC15.06■□□□□ 0
GAFA1Q96PS6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.06■□□□□ 0
GAFA1Q96PS6 AC116407.4-201ENST00000623319 1061 ntBASIC15.06■□□□□ 0
GAFA1Q96PS6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.06■□□□□ 0
GAFA1Q96PS6 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.06■□□□□ 0
GAFA1Q96PS6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
GAFA1Q96PS6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.05■□□□□ 0
GAFA1Q96PS6 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.05■□□□□ 0
GAFA1Q96PS6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
GAFA1Q96PS6 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
GAFA1Q96PS6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
GAFA1Q96PS6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 TSPY22P-201ENST00000427496 604 ntBASIC15.05■□□□□ -0
GAFA1Q96PS6 KRT18P65-201ENST00000439811 1286 ntBASIC15.05■□□□□ -0
GAFA1Q96PS6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 DUTP2-201ENST00000519164 463 ntBASIC15.05■□□□□ -0
GAFA1Q96PS6 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.05■□□□□ -0
GAFA1Q96PS6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.05■□□□□ -0
GAFA1Q96PS6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
GAFA1Q96PS6 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 IER3-202ENST00000376377 1350 ntBASIC15.05■□□□□ -0
GAFA1Q96PS6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 AP000997.3-201ENST00000623333 2250 ntBASIC15.05■□□□□ -0
GAFA1Q96PS6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
GAFA1Q96PS6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
GAFA1Q96PS6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
GAFA1Q96PS6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.04■□□□□ -0
GAFA1Q96PS6 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.04■□□□□ -0
GAFA1Q96PS6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
GAFA1Q96PS6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms