Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP1S3Q96PC3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP1S3Q96PC3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 LINC01126-201ENST00000623515 1646 ntBASIC13.71□□□□□ -0.22
AP1S3Q96PC3 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 AC092368.3-202ENST00000574180 1591 ntBASIC13.71□□□□□ -0.22
AP1S3Q96PC3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP1S3Q96PC3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP1S3Q96PC3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms