Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 CRYGFP-201ENST00000418459 633 ntBASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 NUDT16P1-203ENST00000513809 620 ntBASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 FAM197Y4-202ENST00000622692 608 ntBASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.02■□□□□ 0.96
CHAMP1Q96JM3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 AC132938.6-201ENST00000623828 1655 ntBASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.02■□□□□ 0.95
CHAMP1Q96JM3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 KRT18P55-202ENST00000578578 1546 ntBASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC113410.3-201ENST00000623366 203 ntBASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.01■□□□□ 0.95
CHAMP1Q96JM3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 MIR149-201ENST00000384879 89 ntBASIC21■□□□□ 0.95
CHAMP1Q96JM3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 AC008894.3-201ENST00000624324 3103 ntBASIC21■□□□□ 0.95
CHAMP1Q96JM3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHAMP1Q96JM3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21■□□□□ 0.95
CHAMP1Q96JM3 LINC00602-201ENST00000629776 2065 ntBASIC21■□□□□ 0.95
CHAMP1Q96JM3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 MNT-208ENST00000575394 606 ntTSL 4 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.99■□□□□ 0.95
CHAMP1Q96JM3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms