Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 CYP2T3P-201ENST00000601990 817 ntBASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 LINC02199-201ENST00000506655 2702 ntBASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CHCHD1Q96BP2 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 AC022188.1-201ENST00000620960 1664 ntBASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
CHCHD1Q96BP2 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC131281.2-201ENST00000520478 145 ntBASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 AC008741.2-201ENST00000612792 3115 ntBASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CHCHD1Q96BP2 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 TERF1P2-201ENST00000583350 1212 ntBASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 GRAMD4P4-201ENST00000613563 1115 ntBASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 AL589743.5-201ENST00000616611 1050 ntBASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 MIR6084-201ENST00000622012 110 ntBASIC13.19□□□□□ -0.3
CHCHD1Q96BP2 MYCNOS-205ENST00000641950 531 ntBASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms