Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
ERCC4Q92889 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 AP003041.3-201ENST00000527151 707 ntBASIC20.57■□□□□ 0.88
ERCC4Q92889 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
ERCC4Q92889 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC4Q92889 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC4Q92889 AC026471.5-201ENST00000615068 467 ntBASIC20.57■□□□□ 0.88
ERCC4Q92889 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC4Q92889 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.57■□□□□ 0.88
ERCC4Q92889 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.57■□□□□ 0.88
ERCC4Q92889 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.57■□□□□ 0.88
ERCC4Q92889 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ERCC4Q92889 AL645608.8-201ENST00000606034 2086 ntBASIC20.57■□□□□ 0.88
ERCC4Q92889 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.57■□□□□ 0.88
ERCC4Q92889 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.57■□□□□ 0.88
ERCC4Q92889 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.56■□□□□ 0.88
ERCC4Q92889 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC20.56■□□□□ 0.88
ERCC4Q92889 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ERCC4Q92889 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.56■□□□□ 0.88
ERCC4Q92889 AL390955.1-201ENST00000428694 934 ntBASIC20.56■□□□□ 0.88
ERCC4Q92889 AL355355.2-201ENST00000442321 338 ntBASIC20.56■□□□□ 0.88
ERCC4Q92889 UBE2SP1-201ENST00000450587 669 ntBASIC20.56■□□□□ 0.88
ERCC4Q92889 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.56■□□□□ 0.88
ERCC4Q92889 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
ERCC4Q92889 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
ERCC4Q92889 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ERCC4Q92889 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 PCDHA12-202ENST00000613593 2588 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 AC099398.1-201ENST00000567919 2776 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
ERCC4Q92889 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 AC012618.2-201ENST00000428058 849 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 AP003071.4-201ENST00000562276 1284 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.55■□□□□ 0.88
ERCC4Q92889 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC20.55■□□□□ 0.88
ERCC4Q92889 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 AC009102.3-201ENST00000623118 1491 ntBASIC20.55■□□□□ 0.88
ERCC4Q92889 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ERCC4Q92889 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.55■□□□□ 0.88
ERCC4Q92889 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ERCC4Q92889 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC4Q92889 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.54■□□□□ 0.88
ERCC4Q92889 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC4Q92889 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
ERCC4Q92889 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC20.54■□□□□ 0.88
ERCC4Q92889 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ERCC4Q92889 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms