Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC116407.4-201ENST00000623319 1061 ntBASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 LINC00167-201ENST00000530583 1419 ntBASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SCUBE3Q8IX30 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 AP000997.3-201ENST00000623333 2250 ntBASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 AL353692.3-201ENST00000407031 1396 ntBASIC19.05■□□□□ 0.64
SCUBE3Q8IX30 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 AL390719.2-201ENST00000606993 987 ntBASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 IER3-202ENST00000376377 1350 ntBASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SCUBE3Q8IX30 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 TSPY22P-201ENST00000427496 604 ntBASIC19.03■□□□□ 0.64
SCUBE3Q8IX30 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms