Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
LINC00346Q8IVM7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 AL024508.2-201ENST00000607749 1894 ntBASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 LINC01568-207ENST00000641790 1380 ntBASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 SEC1P-202ENST00000473944 940 ntBASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
LINC00346Q8IVM7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 HMGA1P5-201ENST00000412453 271 ntBASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 AC066615.1-201ENST00000640911 628 ntBASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 GNAS-203ENST00000306120 1878 ntBASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
LINC00346Q8IVM7 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.04■□□□□ 0.16
LINC00346Q8IVM7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms