Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 AL512604.3-201ENST00000569583 964 ntBASIC16.78■□□□□ 0.28
VRK2Q86Y07 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.78■□□□□ 0.28
VRK2Q86Y07 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VRK2Q86Y07 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VRK2Q86Y07 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
VRK2Q86Y07 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
VRK2Q86Y07 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
VRK2Q86Y07 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
VRK2Q86Y07 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.76■□□□□ 0.27
VRK2Q86Y07 ECEL1P3-201ENST00000427961 737 ntBASIC16.76■□□□□ 0.27
VRK2Q86Y07 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 NEK4P2-201ENST00000580004 1012 ntBASIC16.76■□□□□ 0.27
VRK2Q86Y07 MIR3917-201ENST00000580971 93 ntBASIC16.76■□□□□ 0.27
VRK2Q86Y07 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
VRK2Q86Y07 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
VRK2Q86Y07 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK2Q86Y07 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
VRK2Q86Y07 KRT18P22-201ENST00000402024 1347 ntBASIC16.75■□□□□ 0.27
VRK2Q86Y07 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
VRK2Q86Y07 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
VRK2Q86Y07 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.75■□□□□ 0.27
VRK2Q86Y07 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
VRK2Q86Y07 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms