Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 RHOC-210ENST00000425265 866 ntTSL 319.5■□□□□ 0.713e-6■□□□□ 9.6
SND1Q7KZF4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.48■□□□□ 0.713e-6■□□□□ 9.6
SND1Q7KZF4 ALG3-208ENST00000461415 1017 ntTSL 219.39■□□□□ 0.693e-6■□□□□ 9.6
SND1Q7KZF4 TMEM173-212ENST00000514119 1114 ntTSL 318.89■□□□□ 0.611e-9■□□□□ 9.6
SND1Q7KZF4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.533e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-209ENST00000585841 1408 ntTSL 218.32■□□□□ 0.523e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.1■□□□□ 0.493e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.433e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-206ENST00000579123 1874 ntTSL 217.42■□□□□ 0.383e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.373e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-218ENST00000528831 463 ntTSL 317.28■□□□□ 0.363e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC17.26■□□□□ 0.353e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC17.01■□□□□ 0.313e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.94■□□□□ 0.33e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.8■□□□□ 0.283e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.65■□□□□ 0.263e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-207ENST00000581485 617 ntTSL 316.46■□□□□ 0.233e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-202ENST00000419929 762 ntTSL 316.28■□□□□ 0.23e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.193e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-205ENST00000443937 1482 ntTSL 1 (best)16.1■□□□□ 0.173e-6■□□□□ 9.6
SND1Q7KZF4 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.153e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.96■□□□□ 0.153e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-212ENST00000468093 1042 ntTSL 315.84■□□□□ 0.133e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-222ENST00000442406 5129 ntTSL 1 (best)15.7■□□□□ 0.13e-6■□□□□ 9.6
SND1Q7KZF4 AL603832.3-205ENST00000606954 680 ntTSL 215.59■□□□□ 0.093e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.033e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.06■□□□□ 03e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-219ENST00000534717 574 ntTSL 315.06■□□□□ 03e-6■□□□□ 9.6
SND1Q7KZF4 CNBP-210ENST00000512338 502 ntTSL 414.94□□□□□ -0.023e-6■□□□□ 9.6
SND1Q7KZF4 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.023e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC14.67□□□□□ -0.063e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-213ENST00000473074 943 ntTSL 514.65□□□□□ -0.063e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC14.39□□□□□ -0.113e-6■□□□□ 9.6
SND1Q7KZF4 TMEM173-208ENST00000510817 901 ntTSL 214.15□□□□□ -0.141e-9■□□□□ 9.6
SND1Q7KZF4 RHOC-215ENST00000484054 521 ntTSL 514.14□□□□□ -0.153e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.03□□□□□ -0.163e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.163e-6■□□□□ 9.6
SND1Q7KZF4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.163e-6■□□□□ 9.6
SND1Q7KZF4 TMEM173-215ENST00000515507 707 ntTSL 414.03□□□□□ -0.161e-9■□□□□ 9.6
SND1Q7KZF4 RHOC-209ENST00000414971 470 ntTSL 314.02□□□□□ -0.173e-6■□□□□ 9.6
SND1Q7KZF4 NOP56-218ENST00000496775 729 ntTSL 213.72□□□□□ -0.213e-17■□□□□ 9.6
SND1Q7KZF4 RHOC-216ENST00000484280 891 ntTSL 513.58□□□□□ -0.243e-6■□□□□ 9.6
SND1Q7KZF4 NOP56-203ENST00000445139 856 ntTSL 513.54□□□□□ -0.243e-17■□□□□ 9.6
SND1Q7KZF4 NOP56-217ENST00000494697 919 ntTSL 513.41□□□□□ -0.263e-17■□□□□ 9.6
SND1Q7KZF4 NOP56-204ENST00000460258 837 ntTSL 413.08□□□□□ -0.323e-17■□□□□ 9.6
SND1Q7KZF4 EIF4G1-231ENST00000464548 637 ntTSL 513.08□□□□□ -0.323e-6■□□□□ 9.6
SND1Q7KZF4 NOP56-213ENST00000480992 929 ntTSL 512.83□□□□□ -0.363e-7■□□□□ 9.6
SND1Q7KZF4 UFC1-204ENST00000473766 888 ntTSL 212.82□□□□□ -0.363e-6■□□□□ 9.6
SND1Q7KZF4 AL603832.3-202ENST00000607158 807 ntTSL 512.52□□□□□ -0.413e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-203ENST00000433206 4023 ntTSL 2 BASIC12.5□□□□□ -0.413e-6■□□□□ 9.6
SND1Q7KZF4 UFC1-201ENST00000368003 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.413e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.423e-6■□□□□ 9.6
SND1Q7KZF4 DNAJA2-201ENST00000317089 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.453e-6■□□□□ 9.6
SND1Q7KZF4 SLC10A7-205ENST00000507030 1134 ntTSL 1 (best) BASIC11.86□□□□□ -0.513e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-208ENST00000512375 2482 ntTSL 211.83□□□□□ -0.523e-6■□□□□ 9.6
SND1Q7KZF4 UFC1-203ENST00000467540 803 ntTSL 511.78□□□□□ -0.523e-6■□□□□ 9.6
SND1Q7KZF4 LASP1-201ENST00000318008 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.533e-6■□□□□ 9.6
SND1Q7KZF4 RUVBL1-205ENST00000478892 872 ntTSL 311.69□□□□□ -0.543e-6■□□□□ 9.6
SND1Q7KZF4 DNAJA2-204ENST00000617000 1885 ntTSL 211.61□□□□□ -0.553e-6■□□□□ 9.6
SND1Q7KZF4 AL603832.3-203ENST00000606505 813 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.553e-6■□□□□ 9.6
SND1Q7KZF4 AL603832.3-204ENST00000605933 744 ntAPPRIS ALT2 TSL 511.61□□□□□ -0.553e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-221ENST00000441154 4311 ntTSL 5 BASIC11.61□□□□□ -0.553e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-204ENST00000507019 666 ntTSL 2 BASIC11.55□□□□□ -0.563e-6■□□□□ 9.6
SND1Q7KZF4 AL603832.3-201ENST00000471038 792 ntTSL 211.43□□□□□ -0.583e-6■□□□□ 9.6
SND1Q7KZF4 RUVBL1-203ENST00000472125 913 ntTSL 311.01□□□□□ -0.653e-6■□□□□ 9.6
SND1Q7KZF4 UFC1-206ENST00000483191 617 ntTSL 211.01□□□□□ -0.653e-6■□□□□ 9.6
SND1Q7KZF4 RUVBL1-208ENST00000585057 1113 ntTSL 310.98□□□□□ -0.653e-6■□□□□ 9.6
SND1Q7KZF4 EIF4G1-211ENST00000422614 750 ntTSL 510.79□□□□□ -0.683e-6■□□□□ 9.6
SND1Q7KZF4 DNAJA2-202ENST00000563158 1825 ntTSL 510.73□□□□□ -0.693e-6■□□□□ 9.6
SND1Q7KZF4 MAGOH-204ENST00000495868 695 ntTSL 1 (best)10.24□□□□□ -0.773e-6■□□□□ 9.6
SND1Q7KZF4 RHOC-211ENST00000436685 517 ntTSL 510.08□□□□□ -0.83e-6■□□□□ 9.6
SND1Q7KZF4 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC10.03□□□□□ -0.83e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-205ENST00000507349 350 ntTSL 3 BASIC9.82□□□□□ -0.843e-6■□□□□ 9.6
SND1Q7KZF4 SLC10A7-201ENST00000335472 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.913e-6■□□□□ 9.6
SND1Q7KZF4 ELF4-202ENST00000335997 4145 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.933e-6■□□□□ 9.6
SND1Q7KZF4 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC8.9□□□□□ -0.983e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-201ENST00000295491 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.083e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-207ENST00000509970 855 ntTSL 38.17□□□□□ -1.13e-6■□□□□ 9.6
SND1Q7KZF4 MRPS18C-203ENST00000505719 490 ntTSL 37.9□□□□□ -1.143e-6■□□□□ 9.6
SND1Q7KZF4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.66□□□□□ -1.53e-6■□□□□ 9.6
SND1Q7KZF4 SLC16A3-220ENST00000584781 562 ntTSL 423.31■■□□□ 1.327e-13■□□□□ 9.6
SND1Q7KZF4 SLC16A3-215ENST00000582946 586 ntTSL 417.49■□□□□ 0.397e-13■□□□□ 9.6
SND1Q7KZF4 NOTUM-203ENST00000477214 813 ntTSL 524.2■■□□□ 1.467e-26■□□□□ 9.6
SND1Q7KZF4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.377e-26■□□□□ 9.6
SND1Q7KZF4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.29■□□□□ 0.522e-6■□□□□ 9.6
SND1Q7KZF4 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.46□□□□□ -0.092e-6■□□□□ 9.6
SND1Q7KZF4 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.262e-6■□□□□ 9.6
SND1Q7KZF4 PSMA1-207ENST00000528307 1394 ntTSL 59.06□□□□□ -0.962e-6■□□□□ 9.6
SND1Q7KZF4 PSMA1-214ENST00000533331 575 ntTSL 46.23□□□□□ -1.412e-6■□□□□ 9.6
SND1Q7KZF4 C1S-217ENST00000497061 452 ntTSL 218.25■□□□□ 0.516e-6■□□□□ 9.6
SND1Q7KZF4 C1S-209ENST00000461983 950 ntTSL 216.2■□□□□ 0.186e-6■□□□□ 9.6
SND1Q7KZF4 COPA-207ENST00000545284 879 ntTSL 27.62□□□□□ -1.197e-8■□□□□ 9.6
SND1Q7KZF4 LTBP4-232ENST00000610893 578 ntTSL 420.45■□□□□ 0.864e-6■□□□□ 9.6
SND1Q7KZF4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.824e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.574e-6■□□□□ 9.6
SND1Q7KZF4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.414e-6■□□□□ 9.6
SND1Q7KZF4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.414e-6■□□□□ 9.6
SND1Q7KZF4 CAPRIN1-216ENST00000534042 574 ntTSL 517.43■□□□□ 0.384e-6■□□□□ 9.6
SND1Q7KZF4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.14■□□□□ 0.334e-6■□□□□ 9.6
SND1Q7KZF4 CANT1-206ENST00000588096 369 ntTSL 1 (best)16.41■□□□□ 0.225e-7■□□□□ 9.6
Retrieved 100 of 13,567 protein–RNA pairs in 299.1 ms