RNA–Protein interactions for RNA: ENST00000533331.5

PSMA1-214, Transcript of proteasome subunit alpha 1, humanhuman

TSL 4

Gene PSMA1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-214ENST00000533331 AEBP2Q6ZN18 517 aaPredicted RBP24.96■■□□□ 1.59
PSMA1-214ENST00000533331 CHIC1Q5VXU3 224 aa23.5■■□□□ 1.35
PSMA1-214ENST00000533331 SENP3Q9H4L4 574 aaPredicted RBP21.35■■□□□ 1.01
PSMA1-214ENST00000533331 PHF23Q9BUL5 403 aaPredicted RBP20.99■□□□□ 0.95
PSMA1-214ENST00000533331 FOXD1Q16676 465 aa19.9■□□□□ 0.78
PSMA1-214ENST00000533331 MSH5O43196 834 aa18.75■□□□□ 0.59
PSMA1-214ENST00000533331 POTEDQ86YR6 584 aa18.67■□□□□ 0.58
PSMA1-214ENST00000533331 PLPPR3Q6T4P5 718 aa18.65■□□□□ 0.58
PSMA1-214ENST00000533331 PIAS4Q8N2W9 510 aaPredicted RBP18.53■□□□□ 0.56
PSMA1-214ENST00000533331 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
PSMA1-214ENST00000533331 ADRA2BP18089 450 aa18.31■□□□□ 0.52
PSMA1-214ENST00000533331 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
PSMA1-214ENST00000533331 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
PSMA1-214ENST00000533331 SCAF1Q9H7N4 1312 aaKnown RBP16.78■□□□□ 0.28
PSMA1-214ENST00000533331 PPP4R3CPQ6ZMV5 832 aa16.3■□□□□ 0.2
PSMA1-214ENST00000533331 HOXD11P31277 338 aaPredicted RBP16.19■□□□□ 0.18
PSMA1-214ENST00000533331 CACNB1Q02641 598 aaPredicted RBP16.16■□□□□ 0.18
PSMA1-214ENST00000533331 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
PSMA1-214ENST00000533331 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
PSMA1-214ENST00000533331 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
PSMA1-214ENST00000533331 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
PSMA1-214ENST00000533331 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
PSMA1-214ENST00000533331 C1QBPQ07021 282 aaKnown RBP15.73■□□□□ 0.11
PSMA1-214ENST00000533331 NCBP3Q53F19 620 aaKnown RBP15.6■□□□□ 0.09
PSMA1-214ENST00000533331 NPM3O75607 178 aaKnown RBP15.39■□□□□ 0.05
PSMA1-214ENST00000533331 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.35■□□□□ 0.055e-6■■■■□ 19.5
PSMA1-214ENST00000533331 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
PSMA1-214ENST00000533331 KCNA4P22459 653 aa14.87□□□□□ -0.03
PSMA1-214ENST00000533331 SPINK5Q9NQ38 1064 aaPredicted RBP14.87□□□□□ -0.03
PSMA1-214ENST00000533331 DSG3P32926 999 aa14.86□□□□□ -0.03
PSMA1-214ENST00000533331 CAPN15O75808 1086 aa14.84□□□□□ -0.03
PSMA1-214ENST00000533331 SLC4A2P04920 1241 aa14.76□□□□□ -0.05
PSMA1-214ENST00000533331 APLP2Q06481 763 aa14.62□□□□□ -0.07
PSMA1-214ENST00000533331 POTEHQ6S545 545 aa14.59□□□□□ -0.07
PSMA1-214ENST00000533331 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
PSMA1-214ENST00000533331 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.55□□□□□ -0.08
PSMA1-214ENST00000533331 HNRNPUL2Q1KMD3 747 aaKnown RBP14.55□□□□□ -0.08
PSMA1-214ENST00000533331 TRHP20396 242 aaPredicted RBP14.53□□□□□ -0.08
PSMA1-214ENST00000533331 ABCB7O75027 752 aa14.47□□□□□ -0.09
PSMA1-214ENST00000533331 SAMD1Q6SPF0 538 aaPredicted RBP14.46□□□□□ -0.09
PSMA1-214ENST00000533331 MYCNP04198 464 aaPredicted RBP14.26□□□□□ -0.13
PSMA1-214ENST00000533331 RBM42Q9BTD8 480 aaKnown RBP14.2□□□□□ -0.14
PSMA1-214ENST00000533331 POLA2Q14181 598 aa14.1□□□□□ -0.15
PSMA1-214ENST00000533331 FOXD4L1Q9NU39 408 aa13.98□□□□□ -0.17
PSMA1-214ENST00000533331 SLC4A1APQ9BWU0 796 aaKnown RBP13.97□□□□□ -0.17
PSMA1-214ENST00000533331 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
PSMA1-214ENST00000533331 ATF5Q9Y2D1 282 aaPredicted RBP13.91□□□□□ -0.18
PSMA1-214ENST00000533331 ZBTB12Q9Y330 459 aaPredicted RBP13.88□□□□□ -0.19
PSMA1-214ENST00000533331 AKT1S1Q96B36 256 aa13.82□□□□□ -0.2
PSMA1-214ENST00000533331 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
PSMA1-214ENST00000533331 ZBTB22O15209 634 aa13.68□□□□□ -0.22
PSMA1-214ENST00000533331 REM2Q8IYK8 340 aaPredicted RBP13.66□□□□□ -0.22
PSMA1-214ENST00000533331 ATXN8OSP0DMR3 200 aa13.6□□□□□ -0.23
PSMA1-214ENST00000533331 PIP4P2Q8N4L2 257 aa13.58□□□□□ -0.24
PSMA1-214ENST00000533331 SP7Q8TDD2 431 aaPredicted RBP13.57□□□□□ -0.24
PSMA1-214ENST00000533331 PITPNM1O00562 1244 aa13.54□□□□□ -0.24
PSMA1-214ENST00000533331 FXR2P51116 673 aaKnown RBP eCLIP13.49□□□□□ -0.25
PSMA1-214ENST00000533331 SPDYE2BA6NHP3 402 aa13.41□□□□□ -0.26
PSMA1-214ENST00000533331 SPDYE6P0CI01 402 aa13.41□□□□□ -0.26
PSMA1-214ENST00000533331 SPDYE2Q495Y8 402 aa13.41□□□□□ -0.26
PSMA1-214ENST00000533331 FBLN2P98095 1184 aa13.39□□□□□ -0.27
PSMA1-214ENST00000533331 HAX1O00165 279 aa13.34□□□□□ -0.27
PSMA1-214ENST00000533331 MKRN4PQ13434 485 aaPredicted RBP13.28□□□□□ -0.28
PSMA1-214ENST00000533331 SPDYE1Q8NFV5 336 aaPredicted RBP13.23□□□□□ -0.29
PSMA1-214ENST00000533331 SSUH2Q9Y2M2 353 aa13.23□□□□□ -0.29
PSMA1-214ENST00000533331 EVX2Q03828 476 aa13.18□□□□□ -0.3
PSMA1-214ENST00000533331 PRKAR2AP13861 404 aaKnown RBP13.16□□□□□ -0.3
PSMA1-214ENST00000533331 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
PSMA1-214ENST00000533331 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
PSMA1-214ENST00000533331 C19orf67A6NJJ6 358 aa13.06□□□□□ -0.32
PSMA1-214ENST00000533331 PABPN1Q86U42 306 aaKnown RBP eCLIP12.96□□□□□ -0.33
PSMA1-214ENST00000533331 CHADLQ6NUI6 762 aa12.93□□□□□ -0.34
PSMA1-214ENST00000533331 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
PSMA1-214ENST00000533331 GABBR2O75899 941 aa12.88□□□□□ -0.35
PSMA1-214ENST00000533331 CSRNP3Q8WYN3 585 aa12.81□□□□□ -0.36
PSMA1-214ENST00000533331 FARP1Q9Y4F1 1045 aaPredicted RBP12.75□□□□□ -0.37
PSMA1-214ENST00000533331 CD44P16070 742 aaKnown RBP12.73□□□□□ -0.37
PSMA1-214ENST00000533331 LHX8Q68G74 356 aa12.69□□□□□ -0.38
PSMA1-214ENST00000533331 CLCN6P51797 869 aa12.67□□□□□ -0.38
PSMA1-214ENST00000533331 POTEIP0CG38 1075 aa12.63□□□□□ -0.39
PSMA1-214ENST00000533331 STAG3Q9UJ98 1225 aa12.59□□□□□ -0.39
PSMA1-214ENST00000533331 ZNF579Q8NAF0 562 aaKnown RBP12.58□□□□□ -0.4
PSMA1-214ENST00000533331 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
PSMA1-214ENST00000533331 SPDYE4A6NLX3 237 aa12.51□□□□□ -0.41
PSMA1-214ENST00000533331 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
PSMA1-214ENST00000533331 EHMT2Q96KQ7 1210 aa12.47□□□□□ -0.41
PSMA1-214ENST00000533331 DCBLD2Q96PD2 775 aa12.47□□□□□ -0.41
PSMA1-214ENST00000533331 GALR2O43603 387 aaPredicted RBP12.39□□□□□ -0.43
PSMA1-214ENST00000533331 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
PSMA1-214ENST00000533331 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
PSMA1-214ENST00000533331 NPM1P06748 294 aaKnown RBP eCLIP12.33□□□□□ -0.44
PSMA1-214ENST00000533331 PHF12Q96QT6 1004 aa12.31□□□□□ -0.44
PSMA1-214ENST00000533331 PROM2Q8N271 834 aa12.26□□□□□ -0.45
PSMA1-214ENST00000533331 OTUD5Q96G74 571 aa12.21□□□□□ -0.45
PSMA1-214ENST00000533331 POTEB2H3BUK9 544 aa12.2□□□□□ -0.46
PSMA1-214ENST00000533331 ASTLQ6HA08 431 aaPredicted RBP12.16□□□□□ -0.46
PSMA1-214ENST00000533331 PELP1Q8IZL8 1130 aaKnown RBP12.16□□□□□ -0.46
PSMA1-214ENST00000533331 MS4A3Q96HJ5 214 aa12.16□□□□□ -0.46
PSMA1-214ENST00000533331 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
PSMA1-214ENST00000533331 METRNQ9UJH8 293 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms