Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
MRPL54Q6P161 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
MRPL54Q6P161 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 CES3-203ENST00000543856 3178 ntTSL 2 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 AC123595.1-201ENST00000440769 1046 ntBASIC13.71□□□□□ -0.21
MRPL54Q6P161 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
MRPL54Q6P161 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
MRPL54Q6P161 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC13.71□□□□□ -0.22
MRPL54Q6P161 AL596257.1-201ENST00000641463 2694 ntBASIC13.71□□□□□ -0.22
MRPL54Q6P161 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.71□□□□□ -0.22
MRPL54Q6P161 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
MRPL54Q6P161 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.71□□□□□ -0.22
MRPL54Q6P161 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL54Q6P161 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL54Q6P161 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL54Q6P161 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL54Q6P161 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
MRPL54Q6P161 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
MRPL54Q6P161 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 AL357033.4-201ENST00000617703 1807 ntBASIC13.7□□□□□ -0.22
MRPL54Q6P161 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 DOC2GP-204ENST00000639052 2548 ntBASIC13.7□□□□□ -0.22
MRPL54Q6P161 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 PCDHA14-201ENST00000506751 2298 ntBASIC13.7□□□□□ -0.22
MRPL54Q6P161 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.7□□□□□ -0.22
MRPL54Q6P161 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
MRPL54Q6P161 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 AC126755.1-201ENST00000525846 6405 ntBASIC13.69□□□□□ -0.22
MRPL54Q6P161 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.69□□□□□ -0.22
MRPL54Q6P161 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
MRPL54Q6P161 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms