Protein–RNA interactions for Protein: Q00LT1

PRCD, Progressive rod-cone degeneration protein, humanhuman

Predictions only

Length 54 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRCDQ00LT1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 FITM1-202ENST00000559294 800 ntBASIC14.47□□□□□ -0.09
PRCDQ00LT1 MIR4785-201ENST00000585005 73 ntBASIC14.47□□□□□ -0.09
PRCDQ00LT1 Z99916.2-201ENST00000604037 246 ntBASIC14.47□□□□□ -0.09
PRCDQ00LT1 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
PRCDQ00LT1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PRCDQ00LT1 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 PKD1P1-201ENST00000458669 6805 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 MIR718-201ENST00000390190 70 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 AC007663.1-201ENST00000438948 1240 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 DUTP2-201ENST00000519164 463 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 C2orf69P3-201ENST00000565542 1120 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 USP36-216ENST00000589424 970 ntTSL 5 BASIC14.46□□□□□ -0.09
PRCDQ00LT1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 AC010240.3-201ENST00000607688 395 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 AC010653.2-201ENST00000623505 997 ntBASIC14.46□□□□□ -0.09
PRCDQ00LT1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PRCDQ00LT1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
PRCDQ00LT1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PRCDQ00LT1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PRCDQ00LT1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
PRCDQ00LT1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 AP000525.1-201ENST00000608286 694 ntBASIC14.45□□□□□ -0.1
PRCDQ00LT1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PRCDQ00LT1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
PRCDQ00LT1 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms