Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDKL1Q00532 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.83■□□□□ 0.45
CDKL1Q00532 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.83■□□□□ 0.45
CDKL1Q00532 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CDKL1Q00532 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CDKL1Q00532 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.83■□□□□ 0.45
CDKL1Q00532 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDKL1Q00532 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CDKL1Q00532 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.83■□□□□ 0.44
CDKL1Q00532 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 SLC25A6P5-201ENST00000435663 894 ntBASIC17.83■□□□□ 0.44
CDKL1Q00532 SLC25A3P1-201ENST00000443844 931 ntBASIC17.83■□□□□ 0.44
CDKL1Q00532 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.83■□□□□ 0.44
CDKL1Q00532 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL1Q00532 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
CDKL1Q00532 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CDKL1Q00532 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDKL1Q00532 FLJ13224-201ENST00000313737 1514 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 AC124067.4-201ENST00000519691 2379 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 AL024508.2-201ENST00000607749 1894 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.82■□□□□ 0.44
CDKL1Q00532 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 AC012306.2-201ENST00000609350 630 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 AC073912.3-201ENST00000624414 853 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 AL096828.2-201ENST00000567259 1965 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDKL1Q00532 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDKL1Q00532 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.82■□□□□ 0.44
CDKL1Q00532 AC138028.4-201ENST00000564984 1845 ntBASIC17.82■□□□□ 0.44
CDKL1Q00532 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 AC093010.1-201ENST00000473625 1624 ntBASIC17.81■□□□□ 0.44
CDKL1Q00532 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.81■□□□□ 0.44
CDKL1Q00532 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL1Q00532 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.81■□□□□ 0.44
CDKL1Q00532 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.81■□□□□ 0.44
CDKL1Q00532 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.81■□□□□ 0.44
CDKL1Q00532 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
CDKL1Q00532 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 AC097493.4-201ENST00000641197 219 ntBASIC17.81■□□□□ 0.44
CDKL1Q00532 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 AC134043.2-201ENST00000624206 2238 ntBASIC17.81■□□□□ 0.44
CDKL1Q00532 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CDKL1Q00532 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CDKL1Q00532 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL1Q00532 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL1Q00532 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.81■□□□□ 0.44
CDKL1Q00532 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms