Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC21.05■□□□□ 0.96
IRX3P78415 AC068472.1-201ENST00000474589 881 ntBASIC21.05■□□□□ 0.96
IRX3P78415 RNPS1P1-201ENST00000507437 918 ntBASIC21.05■□□□□ 0.96
IRX3P78415 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 AL355877.3-201ENST00000622820 899 ntBASIC21.05■□□□□ 0.96
IRX3P78415 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.05■□□□□ 0.96
IRX3P78415 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21.05■□□□□ 0.96
IRX3P78415 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
IRX3P78415 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
IRX3P78415 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 AC018712.1-201ENST00000455767 687 ntBASIC21.04■□□□□ 0.96
IRX3P78415 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.04■□□□□ 0.96
IRX3P78415 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.04■□□□□ 0.96
IRX3P78415 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 AC139530.3-201ENST00000620344 690 ntBASIC21.04■□□□□ 0.96
IRX3P78415 AC243591.1-201ENST00000452967 1364 ntBASIC21.04■□□□□ 0.96
IRX3P78415 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
IRX3P78415 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
IRX3P78415 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.04■□□□□ 0.96
IRX3P78415 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
IRX3P78415 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
IRX3P78415 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.03■□□□□ 0.96
IRX3P78415 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC21.03■□□□□ 0.96
IRX3P78415 RBM17P3-201ENST00000417687 1192 ntBASIC21.03■□□□□ 0.96
IRX3P78415 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.03■□□□□ 0.96
IRX3P78415 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC21.03■□□□□ 0.96
IRX3P78415 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC21.03■□□□□ 0.96
IRX3P78415 MTDHP3-201ENST00000594186 672 ntBASIC21.03■□□□□ 0.96
IRX3P78415 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
IRX3P78415 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.03■□□□□ 0.96
IRX3P78415 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.03■□□□□ 0.96
IRX3P78415 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
IRX3P78415 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
IRX3P78415 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX3P78415 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC21.02■□□□□ 0.96
IRX3P78415 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX3P78415 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX3P78415 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
IRX3P78415 AL161938.1-201ENST00000569833 2180 ntBASIC21.02■□□□□ 0.96
IRX3P78415 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.02■□□□□ 0.96
IRX3P78415 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms