Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CDC42P60953 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC42P60953 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC42P60953 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC42P60953 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDC42P60953 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CDC42P60953 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDC42P60953 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 NIFKP9-201ENST00000419265 221 ntBASIC16.59■□□□□ 0.25
CDC42P60953 KRT17P3-201ENST00000420566 1262 ntBASIC16.59■□□□□ 0.25
CDC42P60953 UNC93B5-201ENST00000530315 699 ntBASIC16.59■□□□□ 0.25
CDC42P60953 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC42P60953 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.59■□□□□ 0.25
CDC42P60953 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 KRT8P50-201ENST00000562022 1438 ntBASIC16.59■□□□□ 0.25
CDC42P60953 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC42P60953 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC42P60953 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC42P60953 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
CDC42P60953 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC42P60953 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.58■□□□□ 0.24
CDC42P60953 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.58■□□□□ 0.24
CDC42P60953 AC069544.1-201ENST00000609399 999 ntBASIC16.58■□□□□ 0.24
CDC42P60953 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC42P60953 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC42P60953 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CDC42P60953 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC42P60953 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.57■□□□□ 0.24
CDC42P60953 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CDC42P60953 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDC42P60953 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms