Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 KRT18P23-201ENST00000435622 1283 ntBASIC16.73■□□□□ 0.27
SMIM11AP58511 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC16.73■□□□□ 0.27
SMIM11AP58511 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.73■□□□□ 0.27
SMIM11AP58511 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.73■□□□□ 0.27
SMIM11AP58511 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM11AP58511 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.73■□□□□ 0.27
SMIM11AP58511 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SMIM11AP58511 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM11AP58511 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMIM11AP58511 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM11AP58511 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.73■□□□□ 0.27
SMIM11AP58511 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.72■□□□□ 0.27
SMIM11AP58511 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 NUDT16P1-203ENST00000513809 620 ntBASIC16.72■□□□□ 0.27
SMIM11AP58511 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 MIR3180-4-201ENST00000582223 153 ntBASIC16.72■□□□□ 0.27
SMIM11AP58511 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMIM11AP58511 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.72■□□□□ 0.27
SMIM11AP58511 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMIM11AP58511 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.72■□□□□ 0.27
SMIM11AP58511 CROCCP1-201ENST00000426910 5675 ntBASIC16.72■□□□□ 0.27
SMIM11AP58511 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.71■□□□□ 0.27
SMIM11AP58511 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
SMIM11AP58511 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
SMIM11AP58511 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.71■□□□□ 0.27
SMIM11AP58511 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.71■□□□□ 0.27
SMIM11AP58511 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.71■□□□□ 0.27
SMIM11AP58511 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.71■□□□□ 0.27
SMIM11AP58511 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
SMIM11AP58511 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.71■□□□□ 0.27
SMIM11AP58511 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.71■□□□□ 0.27
SMIM11AP58511 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM11AP58511 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM11AP58511 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMIM11AP58511 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMIM11AP58511 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.7■□□□□ 0.26
SMIM11AP58511 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMIM11AP58511 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM11AP58511 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.7■□□□□ 0.26
SMIM11AP58511 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM11AP58511 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms