Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.95■□□□□ 0.78
PEX3P56589 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PEX3P56589 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.94■□□□□ 0.78
PEX3P56589 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PEX3P56589 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PEX3P56589 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.94■□□□□ 0.78
PEX3P56589 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.94■□□□□ 0.78
PEX3P56589 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 GUSBP12-201ENST00000513727 720 ntBASIC19.94■□□□□ 0.78
PEX3P56589 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.94■□□□□ 0.78
PEX3P56589 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 AL592071.1-201ENST00000611956 408 ntBASIC19.94■□□□□ 0.78
PEX3P56589 NPAP1P7-201ENST00000613027 823 ntBASIC19.94■□□□□ 0.78
PEX3P56589 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 KRT18P1-202ENST00000452408 1331 ntBASIC19.94■□□□□ 0.78
PEX3P56589 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.94■□□□□ 0.78
PEX3P56589 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.94■□□□□ 0.78
PEX3P56589 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PEX3P56589 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
PEX3P56589 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.93■□□□□ 0.78
PEX3P56589 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.93■□□□□ 0.78
PEX3P56589 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 AC135050.7-201ENST00000624508 2218 ntBASIC19.93■□□□□ 0.78
PEX3P56589 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 ATP5G2P1-201ENST00000433580 426 ntBASIC19.93■□□□□ 0.78
PEX3P56589 RN7SL606P-201ENST00000472779 293 ntBASIC19.93■□□□□ 0.78
PEX3P56589 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.93■□□□□ 0.78
PEX3P56589 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PEX3P56589 AP002414.4-201ENST00000589764 1148 ntBASIC19.93■□□□□ 0.78
PEX3P56589 AC092119.3-201ENST00000612618 583 ntBASIC19.93■□□□□ 0.78
PEX3P56589 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.93■□□□□ 0.78
PEX3P56589 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.93■□□□□ 0.78
PEX3P56589 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.93■□□□□ 0.78
PEX3P56589 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PEX3P56589 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PEX3P56589 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PEX3P56589 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PEX3P56589 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
PEX3P56589 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.92■□□□□ 0.78
PEX3P56589 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.92■□□□□ 0.78
PEX3P56589 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PEX3P56589 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PEX3P56589 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.92■□□□□ 0.78
PEX3P56589 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.92■□□□□ 0.78
PEX3P56589 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PEX3P56589 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
PEX3P56589 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms