Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CASP4P49662 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
CASP4P49662 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP4P49662 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.77■□□□□ 0.76
CASP4P49662 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.77■□□□□ 0.76
CASP4P49662 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP4P49662 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.77■□□□□ 0.76
CASP4P49662 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.77■□□□□ 0.76
CASP4P49662 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CASP4P49662 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.75
CASP4P49662 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.77■□□□□ 0.75
CASP4P49662 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 LINC01311-201ENST00000565162 1445 ntBASIC19.76■□□□□ 0.75
CASP4P49662 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
CASP4P49662 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CASP4P49662 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.76■□□□□ 0.75
CASP4P49662 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP4P49662 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.76■□□□□ 0.75
CASP4P49662 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP4P49662 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP4P49662 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.76■□□□□ 0.75
CASP4P49662 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.76■□□□□ 0.75
CASP4P49662 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
CASP4P49662 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CASP4P49662 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
CASP4P49662 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CASP4P49662 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CASP4P49662 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.75■□□□□ 0.75
CASP4P49662 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
CASP4P49662 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.75■□□□□ 0.75
CASP4P49662 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 AL671277.2-201ENST00000458060 996 ntBASIC19.75■□□□□ 0.75
CASP4P49662 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.75■□□□□ 0.75
CASP4P49662 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.75■□□□□ 0.75
CASP4P49662 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CASP4P49662 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CASP4P49662 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.75■□□□□ 0.75
CASP4P49662 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP4P49662 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP4P49662 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.75■□□□□ 0.75
CASP4P49662 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CASP4P49662 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP4P49662 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CASP4P49662 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CASP4P49662 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP4P49662 AC100803.2-201ENST00000562459 1963 ntBASIC19.74■□□□□ 0.75
CASP4P49662 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 MIR662-201ENST00000384847 95 ntBASIC19.74■□□□□ 0.75
CASP4P49662 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.74■□□□□ 0.75
CASP4P49662 AC113404.2-201ENST00000507884 177 ntBASIC19.74■□□□□ 0.75
CASP4P49662 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CASP4P49662 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CASP4P49662 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CASP4P49662 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
CASP4P49662 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.74■□□□□ 0.75
CASP4P49662 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.74■□□□□ 0.75
CASP4P49662 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms