Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.14■□□□□ 0.65
CHKAP35790 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.14■□□□□ 0.65
CHKAP35790 AL136038.4-201ENST00000603606 1261 ntBASIC19.14■□□□□ 0.65
CHKAP35790 AC069148.1-201ENST00000608741 768 ntBASIC19.14■□□□□ 0.65
CHKAP35790 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHKAP35790 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CHKAP35790 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.13■□□□□ 0.65
CHKAP35790 AC079602.3-201ENST00000623931 403 ntBASIC19.13■□□□□ 0.65
CHKAP35790 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CHKAP35790 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 AL391807.1-203ENST00000604392 2365 ntBASIC19.13■□□□□ 0.65
CHKAP35790 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHKAP35790 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.13■□□□□ 0.65
CHKAP35790 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHKAP35790 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.12■□□□□ 0.65
CHKAP35790 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.12■□□□□ 0.65
CHKAP35790 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CHKAP35790 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.12■□□□□ 0.65
CHKAP35790 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.12■□□□□ 0.65
CHKAP35790 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.12■□□□□ 0.65
CHKAP35790 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.12■□□□□ 0.65
CHKAP35790 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHKAP35790 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 AP000593.1-201ENST00000393668 712 ntBASIC19.11■□□□□ 0.65
CHKAP35790 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
CHKAP35790 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.11■□□□□ 0.65
CHKAP35790 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHKAP35790 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms