Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
P04436 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
P04436 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
P04436 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.54■□□□□ 0.24
P04436 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.54■□□□□ 0.24
P04436 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.54■□□□□ 0.24
P04436 KRT17P6-201ENST00000453795 1220 ntBASIC16.54■□□□□ 0.24
P04436 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.54■□□□□ 0.24
P04436 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.54■□□□□ 0.24
P04436 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.54■□□□□ 0.24
P04436 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
P04436 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04436 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
P04436 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
P04436 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P04436 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
P04436 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 AC087289.5-201ENST00000586076 3175 ntBASIC16.53■□□□□ 0.24
P04436 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.53■□□□□ 0.24
P04436 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
P04436 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
P04436 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
P04436 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 MINOS1P3-201ENST00000457048 203 ntBASIC16.53■□□□□ 0.24
P04436 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.53■□□□□ 0.24
P04436 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.53■□□□□ 0.24
P04436 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.53■□□□□ 0.24
P04436 LINC01711-201ENST00000598340 967 ntBASIC16.53■□□□□ 0.24
P04436 AL121772.3-201ENST00000610840 674 ntBASIC16.53■□□□□ 0.24
P04436 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
P04436 AC093503.3-201ENST00000624917 2352 ntBASIC16.53■□□□□ 0.24
P04436 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.53■□□□□ 0.24
P04436 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
P04436 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P04436 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
P04436 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
P04436 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.52■□□□□ 0.24
P04436 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.52■□□□□ 0.24
P04436 KRT18P65-201ENST00000439811 1286 ntBASIC16.52■□□□□ 0.24
P04436 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.52■□□□□ 0.24
P04436 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.52■□□□□ 0.24
P04436 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
P04436 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.52■□□□□ 0.24
P04436 AC099336.1-202ENST00000602961 463 ntBASIC16.52■□□□□ 0.24
P04436 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
P04436 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P04436 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.52■□□□□ 0.24
P04436 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.52■□□□□ 0.23
P04436 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
P04436 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.52■□□□□ 0.23
P04436 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.52■□□□□ 0.23
P04436 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
P04436 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.51■□□□□ 0.23
P04436 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
P04436 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P04436 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms