Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
IFNA1P01562 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IFNA1P01562 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
IFNA1P01562 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
IFNA1P01562 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.37□□□□□ -0.11
IFNA1P01562 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.37□□□□□ -0.11
IFNA1P01562 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
IFNA1P01562 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.37□□□□□ -0.11
IFNA1P01562 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.37□□□□□ -0.11
IFNA1P01562 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.36□□□□□ -0.11
IFNA1P01562 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.36□□□□□ -0.11
IFNA1P01562 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.36□□□□□ -0.11
IFNA1P01562 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 GMCL1P1-201ENST00000463439 1581 ntBASIC14.36□□□□□ -0.11
IFNA1P01562 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
IFNA1P01562 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.36□□□□□ -0.11
IFNA1P01562 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC14.36□□□□□ -0.11
IFNA1P01562 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC14.36□□□□□ -0.11
IFNA1P01562 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
IFNA1P01562 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.36□□□□□ -0.11
IFNA1P01562 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
IFNA1P01562 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.36□□□□□ -0.11
IFNA1P01562 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
IFNA1P01562 AL138688.1-201ENST00000624851 1594 ntBASIC14.35□□□□□ -0.11
IFNA1P01562 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.35□□□□□ -0.11
IFNA1P01562 KRT18P14-201ENST00000534205 1250 ntBASIC14.35□□□□□ -0.11
IFNA1P01562 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC14.35□□□□□ -0.11
IFNA1P01562 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 AL357033.4-201ENST00000617703 1807 ntBASIC14.35□□□□□ -0.11
IFNA1P01562 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.35□□□□□ -0.11
IFNA1P01562 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
IFNA1P01562 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
IFNA1P01562 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms