Protein–RNA interactions for Protein: O60759

CYTIP, Cytohesin-interacting protein, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTIPO60759 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 FZD10-202ENST00000539839 3282 ntBASIC16.17■□□□□ 0.18
CYTIPO60759 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CYTIPO60759 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.17■□□□□ 0.18
CYTIPO60759 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.16■□□□□ 0.18
CYTIPO60759 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.16■□□□□ 0.18
CYTIPO60759 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 AC069148.1-201ENST00000608741 768 ntBASIC16.16■□□□□ 0.18
CYTIPO60759 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.16■□□□□ 0.18
CYTIPO60759 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CYTIPO60759 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.16■□□□□ 0.18
CYTIPO60759 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CYTIPO60759 AC093010.1-201ENST00000473625 1624 ntBASIC16.16■□□□□ 0.18
CYTIPO60759 AC104581.1-202ENST00000635932 2618 ntBASIC16.15■□□□□ 0.18
CYTIPO60759 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 AC135776.1-201ENST00000319817 2481 ntBASIC16.15■□□□□ 0.18
CYTIPO60759 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 UPK3BP1-201ENST00000428678 509 ntBASIC16.15■□□□□ 0.18
CYTIPO60759 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.15■□□□□ 0.18
CYTIPO60759 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.15■□□□□ 0.18
CYTIPO60759 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CYTIPO60759 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.15■□□□□ 0.18
CYTIPO60759 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CYTIPO60759 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
CYTIPO60759 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
CYTIPO60759 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CYTIPO60759 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
CYTIPO60759 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYTIPO60759 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYTIPO60759 AC016734.2-201ENST00000624325 1377 ntBASIC16.14■□□□□ 0.17
CYTIPO60759 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYTIPO60759 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CYTIPO60759 LINC00602-201ENST00000629776 2065 ntBASIC16.14■□□□□ 0.17
CYTIPO60759 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms