Protein–RNA interactions for Protein: O60359

CACNG3, Voltage-dependent calcium channel gamma-3 subunit, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG3O60359 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CACNG3O60359 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.66■□□□□ 0.58
CACNG3O60359 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNG3O60359 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNG3O60359 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.66■□□□□ 0.58
CACNG3O60359 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 GMCL1P1-201ENST00000463439 1581 ntBASIC18.66■□□□□ 0.58
CACNG3O60359 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CACNG3O60359 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CACNG3O60359 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 AC099343.3-201ENST00000605834 2503 ntBASIC18.65■□□□□ 0.58
CACNG3O60359 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNG3O60359 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CACNG3O60359 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 EMBP1-201ENST00000458200 901 ntBASIC18.65■□□□□ 0.58
CACNG3O60359 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNG3O60359 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.65■□□□□ 0.58
CACNG3O60359 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNG3O60359 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNG3O60359 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.65■□□□□ 0.58
CACNG3O60359 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CACNG3O60359 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.65■□□□□ 0.58
CACNG3O60359 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CACNG3O60359 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CACNG3O60359 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
CACNG3O60359 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.64■□□□□ 0.58
CACNG3O60359 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CACNG3O60359 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNG3O60359 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNG3O60359 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNG3O60359 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.64■□□□□ 0.57
CACNG3O60359 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.64■□□□□ 0.57
CACNG3O60359 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.64■□□□□ 0.57
CACNG3O60359 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CACNG3O60359 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.63■□□□□ 0.57
CACNG3O60359 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CACNG3O60359 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CACNG3O60359 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CACNG3O60359 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CACNG3O60359 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.63■□□□□ 0.57
CACNG3O60359 FDX1P1-201ENST00000449115 551 ntBASIC18.63■□□□□ 0.57
CACNG3O60359 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.63■□□□□ 0.57
CACNG3O60359 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.63■□□□□ 0.57
CACNG3O60359 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.63■□□□□ 0.57
CACNG3O60359 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.63■□□□□ 0.57
CACNG3O60359 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms