Protein–RNA interactions for Protein: O43653

PSCA, Prostate stem cell antigen, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSCAO43653 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 AL031133.1-201ENST00000406807 723 ntBASIC12.34□□□□□ -0.43
PSCAO43653 PCED1CP-201ENST00000419887 785 ntBASIC12.34□□□□□ -0.43
PSCAO43653 SPDYE15P-201ENST00000424157 909 ntBASIC12.34□□□□□ -0.43
PSCAO43653 UPK3BP1-201ENST00000428678 509 ntBASIC12.34□□□□□ -0.43
PSCAO43653 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.34□□□□□ -0.43
PSCAO43653 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 MIR3917-201ENST00000580971 93 ntBASIC12.34□□□□□ -0.43
PSCAO43653 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 AP000550.4-202ENST00000639755 178 ntBASIC12.34□□□□□ -0.43
PSCAO43653 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.34□□□□□ -0.43
PSCAO43653 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
PSCAO43653 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
PSCAO43653 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.33□□□□□ -0.44
PSCAO43653 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC12.33□□□□□ -0.44
PSCAO43653 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC12.33□□□□□ -0.44
PSCAO43653 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
PSCAO43653 KRT18P38-201ENST00000449496 1282 ntBASIC12.33□□□□□ -0.44
PSCAO43653 SEC1P-202ENST00000473944 940 ntBASIC12.33□□□□□ -0.44
PSCAO43653 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 AC104390.1-201ENST00000555663 520 ntBASIC12.33□□□□□ -0.44
PSCAO43653 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
PSCAO43653 AC093458.2-201ENST00000623150 629 ntBASIC12.33□□□□□ -0.44
PSCAO43653 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 AL157888.1-201ENST00000631930 593 ntBASIC12.33□□□□□ -0.44
PSCAO43653 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
PSCAO43653 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
PSCAO43653 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.32□□□□□ -0.44
PSCAO43653 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.32□□□□□ -0.44
PSCAO43653 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
PSCAO43653 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PSCAO43653 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
PSCAO43653 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.32□□□□□ -0.44
PSCAO43653 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PSCAO43653 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
PSCAO43653 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
PSCAO43653 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
PSCAO43653 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms