Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TO15178 KRT8P26-201ENST00000534154 1276 ntBASIC16.69■□□□□ 0.26
TO15178 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.69■□□□□ 0.26
TO15178 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.69■□□□□ 0.26
TO15178 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.69■□□□□ 0.26
TO15178 AC091076.1-201ENST00000610741 619 ntBASIC16.69■□□□□ 0.26
TO15178 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TO15178 AC009154.2-201ENST00000621177 724 ntBASIC16.69■□□□□ 0.26
TO15178 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.69■□□□□ 0.26
TO15178 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TO15178 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TO15178 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.69■□□□□ 0.26
TO15178 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TO15178 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TO15178 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.68■□□□□ 0.26
TO15178 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TO15178 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 TSPY22P-201ENST00000427496 604 ntBASIC16.68■□□□□ 0.26
TO15178 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
TO15178 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.68■□□□□ 0.26
TO15178 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.68■□□□□ 0.26
TO15178 FLJ13224-201ENST00000313737 1514 ntBASIC16.68■□□□□ 0.26
TO15178 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.68■□□□□ 0.26
TO15178 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.68■□□□□ 0.26
TO15178 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.68■□□□□ 0.26
TO15178 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
TO15178 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TO15178 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TO15178 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.67■□□□□ 0.26
TO15178 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
TO15178 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 TSPY12P-201ENST00000421279 868 ntBASIC16.67■□□□□ 0.26
TO15178 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TO15178 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 AL358472.4-201ENST00000633140 710 ntBASIC16.67■□□□□ 0.26
TO15178 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.67■□□□□ 0.26
TO15178 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.67■□□□□ 0.26
TO15178 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
TO15178 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TO15178 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.67■□□□□ 0.26
TO15178 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.66■□□□□ 0.26
TO15178 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
TO15178 REXO1L9P-201ENST00000604264 2108 ntBASIC16.66■□□□□ 0.26
TO15178 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.66■□□□□ 0.26
TO15178 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TO15178 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TO15178 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.66■□□□□ 0.26
TO15178 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.66■□□□□ 0.26
TO15178 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.66■□□□□ 0.26
TO15178 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.66■□□□□ 0.26
TO15178 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.66■□□□□ 0.26
TO15178 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 AL121672.3-201ENST00000608644 468 ntBASIC16.66■□□□□ 0.26
TO15178 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TO15178 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms