Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPB4C9JG80 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 MIR662-201ENST00000384847 95 ntBASIC16.04■□□□□ 0.16
NPIPB4C9JG80 AC211429.1-201ENST00000415277 523 ntBASIC16.04■□□□□ 0.16
NPIPB4C9JG80 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.04■□□□□ 0.16
NPIPB4C9JG80 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
NPIPB4C9JG80 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 LETM1P2-201ENST00000597330 2178 ntBASIC16.03■□□□□ 0.16
NPIPB4C9JG80 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
NPIPB4C9JG80 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 DDX43P3-201ENST00000441064 443 ntBASIC16.02■□□□□ 0.16
NPIPB4C9JG80 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.02■□□□□ 0.16
NPIPB4C9JG80 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms