Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 GPAT2P1-201ENST00000444924 1672 ntBASIC18.18■□□□□ 0.5
CCDC189A1A4V9 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 AC093677.2-201ENST00000600169 1863 ntBASIC18.18■□□□□ 0.5
CCDC189A1A4V9 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC189A1A4V9 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 SLC25A1P2-201ENST00000430693 912 ntBASIC18.17■□□□□ 0.5
CCDC189A1A4V9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 PCDHA1-201ENST00000378133 2726 ntBASIC18.17■□□□□ 0.5
CCDC189A1A4V9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC189A1A4V9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AC022211.2-201ENST00000585075 2527 ntBASIC18.16■□□□□ 0.5
CCDC189A1A4V9 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AL355355.2-201ENST00000442321 338 ntBASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AC098590.1-201ENST00000468126 897 ntBASIC18.16■□□□□ 0.5
CCDC189A1A4V9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 REXO1L10P-201ENST00000615707 1290 ntBASIC18.16■□□□□ 0.5
CCDC189A1A4V9 REXO1L12P-201ENST00000622156 912 ntBASIC18.16■□□□□ 0.5
CCDC189A1A4V9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC189A1A4V9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 KRT8P50-201ENST00000562022 1438 ntBASIC18.15■□□□□ 0.5
CCDC189A1A4V9 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC189A1A4V9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms