Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 AC021242.3-201ENST00000607598 1377 ntBASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC12.11□□□□□ -0.47
TRBV20-1A0A075B6N2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 AC099791.2-201ENST00000605725 427 ntBASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 CYP2T1P-202ENST00000641596 2535 ntBASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
TRBV20-1A0A075B6N2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms