Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 LINC00167-201ENST00000530583 1419 ntBASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX9Q9Y5X1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX9Q9Y5X1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 DRAXINP1-201ENST00000437611 948 ntBASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 AC093677.2-201ENST00000600169 1863 ntBASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX9Q9Y5X1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 HCG11-201ENST00000411553 5696 ntBASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 LINC00265-3P-201ENST00000447588 903 ntBASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 TOB2P1-201ENST00000469761 992 ntBASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
SNX9Q9Y5X1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SNX9Q9Y5X1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms