Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PCDHB2Q9Y5E7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC091607.1-201ENST00000490318 1060 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 KRT18P31-201ENST00000506277 1292 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC113404.2-201ENST00000507884 177 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AP005901.3-202ENST00000581653 237 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC008687.5-201ENST00000593746 558 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC099336.1-202ENST00000602961 463 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AL024508.2-201ENST00000607749 1894 ntBASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDHB2Q9Y5E7 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 VENTXP7-201ENST00000475503 772 ntBASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 AC011840.4-201ENST00000578471 627 ntBASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.83■□□□□ 0.77
PCDHB2Q9Y5E7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB2Q9Y5E7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB2Q9Y5E7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB2Q9Y5E7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDHB2Q9Y5E7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AC246785.2-201ENST00000432512 513 ntBASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 FAAHP1-202ENST00000446499 1238 ntBASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 EMBP1-201ENST00000458200 901 ntBASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 AC135050.7-201ENST00000624508 2218 ntBASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PCDHB2Q9Y5E7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 BICD1-207ENST00000551848 1962 ntBASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDHB2Q9Y5E7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms