Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC004951.3-201ENST00000418645 1148 ntBASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 MIR6786-201ENST00000616843 113 ntBASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
R3HCC1Q9Y3T6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 IRX1P1-201ENST00000438849 1838 ntBASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 AL162727.3-201ENST00000635661 2787 ntBASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 AL162741.1-201ENST00000565563 1558 ntBASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
R3HCC1Q9Y3T6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 AL118508.1-201ENST00000613502 2345 ntBASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 UNC93B2-201ENST00000285383 730 ntBASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
R3HCC1Q9Y3T6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 AC011298.2-201ENST00000617989 482 ntBASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
R3HCC1Q9Y3T6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms