Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.76■□□□□ 0.27
NPIPA1Q9UND3 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AP000867.3-201ENST00000524675 377 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AC111152.3-201ENST00000569699 673 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 RN7SL510P-201ENST00000581311 263 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AC090164.3-201ENST00000610780 2143 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 AC005082.1-201ENST00000413042 2259 ntBASIC16.75■□□□□ 0.27
NPIPA1Q9UND3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 PVRIG2P-201ENST00000435460 978 ntBASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AC005332.3-201ENST00000589904 676 ntBASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NPIPA1Q9UND3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.73■□□□□ 0.27
NPIPA1Q9UND3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms