Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD7Q9P2D1 AC148477.5-201ENST00000625164 1645 ntBASIC19.15■□□□□ 0.66
CHD7Q9P2D1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 AC138761.1-201ENST00000584393 385 ntBASIC19.15■□□□□ 0.66
CHD7Q9P2D1 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 MTCL1P1-201ENST00000446207 792 ntBASIC19.15■□□□□ 0.66
CHD7Q9P2D1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC19.15■□□□□ 0.66
CHD7Q9P2D1 GPR89P-201ENST00000407924 1495 ntBASIC19.15■□□□□ 0.66
CHD7Q9P2D1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD7Q9P2D1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.14■□□□□ 0.65
CHD7Q9P2D1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 BX005266.1-201ENST00000473402 457 ntBASIC19.14■□□□□ 0.65
CHD7Q9P2D1 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 AC108073.2-201ENST00000464002 357 ntBASIC19.14■□□□□ 0.65
CHD7Q9P2D1 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.14■□□□□ 0.65
CHD7Q9P2D1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 AC010460.3-201ENST00000511359 1579 ntBASIC19.13■□□□□ 0.65
CHD7Q9P2D1 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 AC112698.1-201ENST00000510299 916 ntBASIC19.13■□□□□ 0.65
CHD7Q9P2D1 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 TSEN15P1-201ENST00000423257 515 ntBASIC19.13■□□□□ 0.65
CHD7Q9P2D1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 AC018845.2-201ENST00000568326 409 ntBASIC19.13■□□□□ 0.65
CHD7Q9P2D1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CHD7Q9P2D1 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 PUS1-205ENST00000535067 838 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 AC009102.3-201ENST00000623118 1491 ntBASIC19.12■□□□□ 0.65
CHD7Q9P2D1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CHD7Q9P2D1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 PRSS29P-201ENST00000440800 595 ntBASIC19.11■□□□□ 0.65
CHD7Q9P2D1 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.11■□□□□ 0.65
CHD7Q9P2D1 AC132938.6-201ENST00000623828 1655 ntBASIC19.11■□□□□ 0.65
CHD7Q9P2D1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms