Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 AC026748.1-201ENST00000624349 3251 ntBASIC9.29□□□□□ -0.92
CDC42SE1Q9NRR8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SLC9A3P3-201ENST00000457608 2229 ntBASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TET3-201ENST00000305799 5174 ntTSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 AC004817.3-201ENST00000602957 2129 ntBASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 SMPD5-203ENST00000639008 1464 ntBASIC9.28□□□□□ -0.92
CDC42SE1Q9NRR8 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.92
CDC42SE1Q9NRR8 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 FP325331.1-202ENST00000623531 1380 ntBASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 SLC9A7P1-201ENST00000554295 3311 ntBASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 AC006116.8-202ENST00000587620 1550 ntBASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
CDC42SE1Q9NRR8 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms