Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 CRYGEP-201ENST00000412192 528 ntBASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 PRYP5-201ENST00000451909 266 ntBASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZFYVE28Q9HCC9 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.64■□□□□ 0.9
ZFYVE28Q9HCC9 PMPCAP1-201ENST00000508114 1576 ntBASIC20.64■□□□□ 0.9
ZFYVE28Q9HCC9 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.64■□□□□ 0.9
ZFYVE28Q9HCC9 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 AC073592.4-201ENST00000623827 446 ntBASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZFYVE28Q9HCC9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 MIR770-201ENST00000390219 98 ntBASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 AC007967.3-201ENST00000434308 558 ntBASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 AC011467.4-201ENST00000594891 528 ntBASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 AC092865.6-201ENST00000642101 219 ntBASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZFYVE28Q9HCC9 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 LINC01126-201ENST00000623515 1646 ntBASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.62■□□□□ 0.89
ZFYVE28Q9HCC9 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 MKNK2P1-201ENST00000437526 628 ntBASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 AC106028.4-201ENST00000614509 607 ntBASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZFYVE28Q9HCC9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms