Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HIPK3Q9H422 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HIPK3Q9H422 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.77■□□□□ 0.76
HIPK3Q9H422 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 LAGE3P1-201ENST00000425356 484 ntBASIC19.77■□□□□ 0.76
HIPK3Q9H422 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.77■□□□□ 0.76
HIPK3Q9H422 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HIPK3Q9H422 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 AC009947.1-201ENST00000444350 727 ntBASIC19.76■□□□□ 0.75
HIPK3Q9H422 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HIPK3Q9H422 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HIPK3Q9H422 AC022898.2-201ENST00000616822 1312 ntBASIC19.76■□□□□ 0.75
HIPK3Q9H422 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 AC023274.1-201ENST00000418278 595 ntBASIC19.75■□□□□ 0.75
HIPK3Q9H422 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 DNAJB3-202ENST00000449667 1266 ntBASIC19.75■□□□□ 0.75
HIPK3Q9H422 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 AC112698.1-201ENST00000510299 916 ntBASIC19.75■□□□□ 0.75
HIPK3Q9H422 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC19.75■□□□□ 0.75
HIPK3Q9H422 AP000867.4-201ENST00000641616 219 ntBASIC19.75■□□□□ 0.75
HIPK3Q9H422 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HIPK3Q9H422 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms