Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 AC011558.1-201ENST00000623459 338 ntBASIC16.86■□□□□ 0.29
TM9SF2Q99805 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 AC083906.6-201ENST00000641366 219 ntBASIC16.86■□□□□ 0.29
TM9SF2Q99805 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 AC139713.2-201ENST00000641328 2723 ntBASIC16.86■□□□□ 0.29
TM9SF2Q99805 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.86■□□□□ 0.29
TM9SF2Q99805 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TM9SF2Q99805 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.85■□□□□ 0.29
TM9SF2Q99805 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 AL356309.3-201ENST00000624132 1934 ntBASIC16.85■□□□□ 0.29
TM9SF2Q99805 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TM9SF2Q99805 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM9SF2Q99805 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.84■□□□□ 0.29
TM9SF2Q99805 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TM9SF2Q99805 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM9SF2Q99805 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms