Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.4■□□□□ 0.38
BARD1Q99728 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
BARD1Q99728 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
BARD1Q99728 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.4■□□□□ 0.38
BARD1Q99728 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.4■□□□□ 0.38
BARD1Q99728 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.4■□□□□ 0.38
BARD1Q99728 HYMAI.1-201ENST00000620949 238 ntBASIC17.4■□□□□ 0.38
BARD1Q99728 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
BARD1Q99728 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.4■□□□□ 0.38
BARD1Q99728 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
BARD1Q99728 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.4■□□□□ 0.38
BARD1Q99728 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
BARD1Q99728 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.39■□□□□ 0.38
BARD1Q99728 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.39■□□□□ 0.38
BARD1Q99728 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
BARD1Q99728 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 AC135776.1-201ENST00000319817 2481 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 AP000523.1-201ENST00000398242 1049 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 AC026396.1-201ENST00000419388 421 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 TSPY23P-201ENST00000440136 739 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 NEK4P2-201ENST00000580004 1012 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.39■□□□□ 0.37
BARD1Q99728 AC069148.1-201ENST00000608741 768 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 AL162741.1-201ENST00000565563 1558 ntBASIC17.39■□□□□ 0.37
BARD1Q99728 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
BARD1Q99728 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
BARD1Q99728 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
BARD1Q99728 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
BARD1Q99728 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 KRT8P45-201ENST00000414328 1447 ntBASIC17.38■□□□□ 0.37
BARD1Q99728 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 HCG4P8-203ENST00000443049 980 ntBASIC17.38■□□□□ 0.37
BARD1Q99728 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.38■□□□□ 0.37
BARD1Q99728 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.38■□□□□ 0.37
BARD1Q99728 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
BARD1Q99728 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.38■□□□□ 0.37
BARD1Q99728 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
BARD1Q99728 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms