Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SCG3Q8WXD2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 AP000593.1-201ENST00000393668 712 ntBASIC18.6■□□□□ 0.57
SCG3Q8WXD2 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 NEK4P2-201ENST00000580004 1012 ntBASIC18.6■□□□□ 0.57
SCG3Q8WXD2 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SCG3Q8WXD2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 AL023973.1-201ENST00000624619 620 ntBASIC18.59■□□□□ 0.57
SCG3Q8WXD2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.59■□□□□ 0.57
SCG3Q8WXD2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SCG3Q8WXD2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.58■□□□□ 0.56
SCG3Q8WXD2 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SCG3Q8WXD2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.58■□□□□ 0.56
SCG3Q8WXD2 MIR564-202ENST00000385049 94 ntBASIC18.58■□□□□ 0.56
SCG3Q8WXD2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.58■□□□□ 0.56
SCG3Q8WXD2 AL031133.1-201ENST00000406807 723 ntBASIC18.58■□□□□ 0.56
SCG3Q8WXD2 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.58■□□□□ 0.56
SCG3Q8WXD2 MCCD1P1-208ENST00000445732 328 ntBASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms