Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 AC113404.2-201ENST00000507884 177 ntBASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 BNIP3P18-201ENST00000593976 575 ntBASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 REXO1L6P-202ENST00000619970 1078 ntBASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 AL133373.2-201ENST00000623187 2828 ntBASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHKBP1Q8TBC3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 SAPCD2P3-201ENST00000455031 850 ntBASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 SDHAP2-201ENST00000455183 2001 ntBASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SHKBP1Q8TBC3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 MYLKP1-201ENST00000509077 1580 ntBASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 AF238378.1-201ENST00000526806 358 ntBASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SHKBP1Q8TBC3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SHKBP1Q8TBC3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SHKBP1Q8TBC3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms