Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.25■□□□□ 0.83
USP38Q8NB14 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 IGHGP-201ENST00000390555 1178 ntBASIC20.25■□□□□ 0.83
USP38Q8NB14 AC005104.2-201ENST00000427818 678 ntBASIC20.25■□□□□ 0.83
USP38Q8NB14 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.25■□□□□ 0.83
USP38Q8NB14 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.25■□□□□ 0.83
USP38Q8NB14 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 AP001005.1-201ENST00000571755 1248 ntBASIC20.25■□□□□ 0.83
USP38Q8NB14 AC027796.2-201ENST00000575326 344 ntBASIC20.25■□□□□ 0.83
USP38Q8NB14 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.25■□□□□ 0.83
USP38Q8NB14 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
USP38Q8NB14 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 Z98044.1-201ENST00000632503 1764 ntBASIC20.25■□□□□ 0.83
USP38Q8NB14 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
USP38Q8NB14 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.25■□□□□ 0.83
USP38Q8NB14 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP38Q8NB14 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.25■□□□□ 0.83
USP38Q8NB14 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.24■□□□□ 0.83
USP38Q8NB14 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.24■□□□□ 0.83
USP38Q8NB14 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.24■□□□□ 0.83
USP38Q8NB14 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.24■□□□□ 0.83
USP38Q8NB14 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
USP38Q8NB14 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.24■□□□□ 0.83
USP38Q8NB14 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.24■□□□□ 0.83
USP38Q8NB14 AL691403.2-201ENST00000618460 490 ntBASIC20.24■□□□□ 0.83
USP38Q8NB14 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.24■□□□□ 0.83
USP38Q8NB14 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.24■□□□□ 0.83
USP38Q8NB14 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
USP38Q8NB14 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP38Q8NB14 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.23■□□□□ 0.83
USP38Q8NB14 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.23■□□□□ 0.83
USP38Q8NB14 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP38Q8NB14 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.23■□□□□ 0.83
USP38Q8NB14 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP38Q8NB14 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 AC104819.1-201ENST00000504587 486 ntBASIC20.23■□□□□ 0.83
USP38Q8NB14 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.23■□□□□ 0.83
USP38Q8NB14 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.23■□□□□ 0.83
USP38Q8NB14 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.23■□□□□ 0.83
USP38Q8NB14 TP73-AS1-207ENST00000624167 988 ntBASIC20.23■□□□□ 0.83
USP38Q8NB14 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.23■□□□□ 0.83
USP38Q8NB14 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP38Q8NB14 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP38Q8NB14 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP38Q8NB14 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP38Q8NB14 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
USP38Q8NB14 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.22■□□□□ 0.83
USP38Q8NB14 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP38Q8NB14 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
USP38Q8NB14 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP38Q8NB14 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.22■□□□□ 0.83
USP38Q8NB14 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms