Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.55□□□□□ -0.24
HIST3H2BBQ8N257 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 AC133963.1-201ENST00000504166 1679 ntBASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
HIST3H2BBQ8N257 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AC112777.1-201ENST00000540175 1423 ntBASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AC087633.2-202ENST00000565166 1439 ntBASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 MTMR9LP-203ENST00000426597 1545 ntBASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 KRT18P55-202ENST00000578578 1546 ntBASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST3H2BBQ8N257 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.52□□□□□ -0.24
HIST3H2BBQ8N257 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms