Protein–RNA interactions for Protein: Q8IZU3

SYCP3, Synaptonemal complex protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3Q8IZU3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 PHGDH-209ENST00000641074 1780 ntBASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SYCP3Q8IZU3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 LINC01311-201ENST00000565162 1445 ntBASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 AC008687.5-201ENST00000593746 558 ntBASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.03■□□□□ 0.8
SYCP3Q8IZU3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AL390961.4-201ENST00000623958 2535 ntBASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AC024563.2-201ENST00000603282 481 ntBASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 AL354751.1-201ENST00000412768 1863 ntBASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SYCP3Q8IZU3 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYCP3Q8IZU3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.02■□□□□ 0.79
SYCP3Q8IZU3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SYCP3Q8IZU3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SYCP3Q8IZU3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 HBZP1-201ENST00000354915 429 ntBASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 HLA-F-220ENST00000434407 884 ntBASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 AL671277.2-201ENST00000458060 996 ntBASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 REXO1L9P-201ENST00000604264 2108 ntBASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.01■□□□□ 0.79
SYCP3Q8IZU3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms