Protein–RNA interactions for Protein: Q8IYK2

CCDC105, Coiled-coil domain-containing protein 105, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC105Q8IYK2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCDC105Q8IYK2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CCDC105Q8IYK2 NOC2LP2-201ENST00000407594 1944 ntBASIC19.59■□□□□ 0.73
CCDC105Q8IYK2 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.59■□□□□ 0.73
CCDC105Q8IYK2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 PCDHB18P-201ENST00000524813 2368 ntBASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCDC105Q8IYK2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.58■□□□□ 0.72
CCDC105Q8IYK2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 KRT8P41-201ENST00000533985 1514 ntBASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CCDC105Q8IYK2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 AC009078.2-202ENST00000463353 338 ntBASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 AC068880.1-201ENST00000507289 2297 ntBASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC105Q8IYK2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC105Q8IYK2 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms