Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 AC009113.1-201ENST00000570267 2443 ntBASIC17.35■□□□□ 0.37
RAB43Q86YS6 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RAB43Q86YS6 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 AP002414.4-201ENST00000589764 1148 ntBASIC17.34■□□□□ 0.37
RAB43Q86YS6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.34■□□□□ 0.37
RAB43Q86YS6 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RAB43Q86YS6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB43Q86YS6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RAB43Q86YS6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.33■□□□□ 0.37
RAB43Q86YS6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB43Q86YS6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.33■□□□□ 0.37
RAB43Q86YS6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB43Q86YS6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RAB43Q86YS6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.33■□□□□ 0.37
RAB43Q86YS6 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.33■□□□□ 0.37
RAB43Q86YS6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RAB43Q86YS6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB43Q86YS6 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
RAB43Q86YS6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 KRT18P1-202ENST00000452408 1331 ntBASIC17.32■□□□□ 0.36
RAB43Q86YS6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 PVRIG2P-201ENST00000435460 978 ntBASIC17.32■□□□□ 0.36
RAB43Q86YS6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB43Q86YS6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB43Q86YS6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms