Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
COL23A1Q86Y22 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 PAWRP1-201ENST00000451083 565 ntBASIC22.65■■□□□ 1.22
COL23A1Q86Y22 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 RNF34-208ENST00000555076 593 ntTSL 3 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 AC093512.1-201ENST00000617969 520 ntBASIC22.65■■□□□ 1.22
COL23A1Q86Y22 AL589182.2-201ENST00000619332 1049 ntBASIC22.65■■□□□ 1.22
COL23A1Q86Y22 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
COL23A1Q86Y22 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC22.64■■□□□ 1.22
COL23A1Q86Y22 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 PRR29-209ENST00000582540 967 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC22.64■■□□□ 1.21
COL23A1Q86Y22 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 RPL28-205ENST00000558131 444 ntTSL 5 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 AC138761.1-201ENST00000584393 385 ntBASIC22.63■■□□□ 1.21
COL23A1Q86Y22 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 AC004790.2-201ENST00000623588 572 ntBASIC22.63■■□□□ 1.21
COL23A1Q86Y22 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL23A1Q86Y22 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 TBC1D3P5-201ENST00000579401 1545 ntBASIC22.62■■□□□ 1.21
COL23A1Q86Y22 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 IGLL3P-201ENST00000412472 434 ntBASIC22.62■■□□□ 1.21
COL23A1Q86Y22 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL23A1Q86Y22 PRSS29P-201ENST00000440800 595 ntBASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms